Table of Contents
HPC-IODC: HPC I/O in the Data Center Workshop
Managing scientific data at large scale is challenging for scientists but also for the host data center. The storage and file systems deployed within a data center are expected to meet users' requirements for data integrity and high performance across heterogeneous and concurrently running applications.
With new storage technologies and layers in the memory hierarchy, the picture is becoming murkier. To effectively manage the data load within a data center, I/O experts must understand how users expect to use these new storage technologies and what services they should provide in order to enhance user productivity. We seek to ensure a systems-level perspective is included in these discussions.
In this workshop we bring together I/O experts from data centers and application workflows to share current practices for scientific workflows, issues and obstacles for both hardware and the software stack, and R&D to overcome these issues.
The workshop content is build on two tracks with calls for papers/talks:
- research paper presentation – you'll need to submit a short paper regarding relevant research for I/O in the datacenter.
- talks from I/O experts – you'll need to submit a rough outline for your talk.
Contributions to both tracks are peer reviewed and require submission of the respective research paper or idea for your presentation via Easychair (see the descriptions below).
The workshop is held in conjunction with the ISC-HPC during the ISC workshop day. Note that the attendance of ISC workshops requires a workshop pass. The HPC-IODC workshop is half day but embedded into a full-day program for I/O that we organize with the team of the WOPSSS. Our cooperation includes the alignment of sessions and the potential to shift papers between the two workshops. We encourage participants to take the opportunity to attend both events. See also our last year's workshop web page.
|Date||Thursday June 22nd, 2017|
|Venue||Marriott Hotel, Frankfurt, Germany, Details about the ISC-HPC venue|
The workshop is organized by
- Wolfgang Frings (Jülich Supercomputing Center)
- Javier Garcia Blas (University Carlos III of Madrid)
- Rob Ross (Argonne National Laboratory)
- Carlos Maltzahn (University of California, Santa Cruz)
- Thomas Boenisch (HLRS)
- Sai Narasimhamurthy (Seagate)
- Jean-Thomas Acquaviva (DDN)
- Julian Kunkel (DKRZ, Germany)
- Jay Lofstead (Sandia National Laboratory)
- Colin McMurtrie (CSCS, Switzerland)
- 09:00 Welcome – Julian Kunkel
- 09:10 Research paper session, chair Jay Lofstead
- 09:10 GPU Erasure Coding for Campaign Storage
Walker Haddock, Matthew Curry, Purushotham Bangalore and Tony Skjellum
- 09:20 Real-Time I/O-Monitoring of HPC Applications with SIOX, Elasticsearch, Grafana and FUSE
Eugen Betke and Julian Kunkel
- 09:30 Simulation of Hierarchical Storage Systems for TCO
Jakob Luettgau and Julian Kunkel
- 09:40 Characterizing Output Bottlenecks in a Supercomputer
Bing Xie, Jay Lofstead, David Dillow, Sarp Oral, Scott Klasky and Jeff Chase
- 09:50 PIOM-PX: A Framework for Modeling the I/O Behavior of Parallel Scientific Applications
Pilar Gomez-Sanchez, Sandra Mendez, Dolores Rexachs and Emilo Luque
- 10:00 Expert talk session 1
- 10:00 The UK JASMIN Environmental Data Commons
- 10:20 ECMWF's IO Challenges and the path to Exascale Numerical Weather Prediction
- 10:40 Extraordinary HPC file system solutions at KIT
- 11:00 Coffee break
- 11:30 Expert talk session 2
- 11:30 High Availability Operation of Parallel File Systems at the K computer
- 11:45 Understanding Monitored I/O Patterns on LRZ HPC systems
- 12:00 High-Performance Modelling and Simulation for Big Data Applications
- 12:15 Catching rogue jobs before they overload the storage: the importance of I/O profiling
- 12:30 Towards a Distributed Object Database for Multi-Physics Simulation and Volumetric Light Field Rendering
Yahya H. Mirza
- 12:45 Discussion – Jay Lofstead
- 13:00 End
The call for papers and talks is now closed. The workshop is integrated into ISC-HPC. We welcome everybody to join the workshop, including:
- I/O experts from data centers and industry.
- Researchers/Engineers working on high-performance I/O for data centers.
- Interested domain scientists and computer scientists interested in discussing I/O issues.
- Vendors are also welcome, but their presentations must align with data center topics (e.g. how do they manage their own clusters) and not focus on commercial aspects.
We especially welcome participants that are willing to give a presentation about the I/O of the representing institutions data center. Note that such presentations should cover the topics mentioned below.
Track: research papers
We accept short papers with up to 12 pages (excl. references) in LNCS format. Please see the instructions and templates for authors provided by Springer.
Our targeted proceedings are ISC's post-conference workshop proceedings in Springers LNCS. We use Easychair for managing the proceedings and PC interaction.
For accepted papers, the length of the talk during the workshop depends on the controversiality and novelty of the approach (the length is decided based on the preference provided by the authors and feedback from the reviewers). We also allow virtual participation (without attending the workshop personally). All relevant work in the area of data center storage will be able to publish with our joint workshop proceedings, we just believe the available time should be used best to discuss ambivalent topics.
- Submission deadline: 2017-04-12 AoE
- Author notification: 2017-04-25
- Pre-final submission: 2017-06-10 (to be shared during the workshop)
- Workshop: 2017-06-22
- Camera-ready papers: 2017-07-22 – As they are needed for ISC's post-conference workshop proceedings. We embrace the chance for authors to improve their papers based on the feedback received during the workshop.
Track: Talks by I/O experts
The topics of interest in this track include but are not limited to:
- A description of the operational aspects of your data center
- A particular solution for certain data center workloads in production
We use Easychair for managing the acceptance and PC interaction. If you are interested to participate please submit a short (1/2 page) intended abstract of your talk together with a short Bio.
Deadlines for the submission of the abstract
- Submission deadline: 2017-04-13 AoE
- Author notification: 2017-04-25
The following list of items should be tried to be integrated into a talk covering your data center, if possible. We hope your sites administrator will support you to gather the information with little effort.
- Workload characterization
- Scientific Workflow (give a short introduction)
- A typical use-case (if multiple are known, feel free to present more)
- Involved number of files / amount of data
- Job mix
- Node utilization (rel. to peak-performance)
- System view
- Schema of the client/server infrastructure
- Capacities (Tape, Disk, etc.)
- Potential peak-performance of the storage
- Optional: performance results of acceptance tests.
- Software / Middleware used, e.g. NetCDF 4.X, HDF5, …
- Monitoring infrastructure
- Tools and systems used to gather and analyse utilization
- Actual observed performance in production
- Throughput graphs of the storage (e.g. from Ganglia)
- Metadata throughput (Ops/s)
- Files on the storage
- Number of files (if possible per file type)
- Distribution of file sizes
- Issues / Obstacles
- Pain points (what is seen as the biggest problem(s) and suggested solutions, if known)
- Conducted R&D (that aim to mitigate issues)
- Future perspective
- Known or projected future workload characterization
- Scheduled hardware upgrades and new capabilities we should focus on exploiting as a community
- Ideal system characteristics and how it addresses current problems or challenges
- what hardware should be added
- what software should be developed to make things work better (capabilities perspective)
- Items requiring discussion to work through how to address